UniProtKB AC (Name) | UniProtKB Section | Organism | Description | |
---|---|---|---|---|
Q9WV08 (APJ_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Apelin receptor; Angiotensin receptor-like 1; G-protein coupled receptor APJ; MSR; | |
D3Z1D3 (CEFIP_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Cardiac-enriched FHL2-interacting protein; | |
P04370 (MBP_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Myelin basic protein; Myelin A1 protein; | |
P61216 (TAF13_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Transcription initiation factor TFIID subunit 13; Transcription initiation factor TFIID 18 kDa subunit; | |
Q2EG98 (PK1L3_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Polycystin-1-like protein 3; PC1-like 3 protein; Polycystic kidney disease protein 1-like 3; | |
Q9JHD2 (KAT2A_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Histone acetyltransferase KAT2A; General control of amino acid synthesis protein 5-like 2; Histone acetyltransferase GCN5; Histone glutaryltransferase KAT2A; Histone succinyltransferase KAT2A; Lysine acetyltransferase 2A; | |
F7BJB9 (MORC3_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | MORC family CW-type zinc finger protein 3; Nuclear matrix protein 2; Zinc finger CW-type coiled-coil domain protein 3; | |
Q9DC23 (DJC10_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | DnaJ homolog subfamily C member 10; Endoplasmic reticulum DNA J domain-containing protein 5; Endoplasmic reticulum DnaJ-PDI fusion protein 1; J domain-containing protein disulfide isomerase-like protein; | |
O55142 (RL35A_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Large ribosomal subunit protein eL33; 60S ribosomal protein L35a; | |
P98078 (DAB2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Disabled homolog 2; Adaptor molecule disabled-2; Differentially expressed in ovarian carcinoma 2; Mitogen-responsive phosphoprotein; | |
O70348 (DXO_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Decapping and exoribonuclease protein; 5'-3' exoribonuclease DXO; Dom-3 homolog Z; NAD-capped RNA hydrolase DXO; | |
Q8C147 (DOCK8_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Dedicator of cytokinesis protein 8; | |
P03911 (NU4M_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | NADH-ubiquinone oxidoreductase chain 4; NADH dehydrogenase subunit 4; | |
O08712 (TR11B_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Tumor necrosis factor receptor superfamily member 11B; Osteoclastogenesis inhibitory factor; Osteoprotegerin; | |
Q9QYG0 (NDRG2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Protein NDRG2; N-myc downstream-regulated gene 2 protein; Protein Ndr2; | |
Q93092 (TALDO_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Transaldolase; | |
Q9ES00 (UBE4B_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Ubiquitin conjugation factor E4 B; RING-type E3 ubiquitin transferase E4 B; Ubiquitin fusion degradation protein 2; | |
P30561 (AHR_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Aryl hydrocarbon receptor; | |
O35253 (SMAD7_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Mothers against decapentaplegic homolog 7; Mothers against decapentaplegic homolog 8; SMAD family member 7; | |
P35278 (RAB5C_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Ras-related protein Rab-5C; | |
P70158 (ASM3A_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Cyclic GMP-AMP phosphodiesterase SMPDL3A; Acid sphingomyelinase-like phosphodiesterase 3a; | |
Q9CQS2 (NOP10_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | H/ACA ribonucleoprotein complex subunit 3; Nucleolar protein 10; Nucleolar protein family A member 3; snoRNP protein NOP10; | |
Q9Z1W5 (SERP1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Stress-associated endoplasmic reticulum protein 1; Ribosome-attached membrane protein 4; | |
Q8R0F8 (FAHD1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Acylpyruvase FAHD1, mitochondrial; Fumarylacetoacetate hydrolase domain-containing protein 1; Oxaloacetate decarboxylase; | |
Q8R4P5 (TMC1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Transmembrane channel-like protein 1; Beethoven protein; Deafness protein; Transmembrane cochlear-expressed protein 1; | |
P42867 (GPT_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase; GlcNAc-1-P transferase; N-acetylglucosamine-1-phosphate transferase; | |
Q9DBG6 (RPN2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 63 kDa subunit; Ribophorin II; Ribophorin-2; | |
P70195 (PSB7_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Proteasome subunit beta type-7; Macropain chain Z; Multicatalytic endopeptidase complex chain Z; Proteasome subunit Z; | |
P59708 (SF3B6_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Splicing factor 3B subunit 6; Pre-mRNA branch site protein p14; SF3b 14 kDa subunit; | |
Q9EPV8 (UBL5_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Ubiquitin-like protein 5; | |
P47911 (RL6_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Large ribosomal subunit protein eL6; 60S ribosomal protein L6; TAX-responsive enhancer element-binding protein 107; | |
Q8BGS2 (BOLA2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | BolA-like protein 2; | |
Q2TV84 (TRPM1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Transient receptor potential cation channel subfamily M member 1; Long transient receptor potential channel 1; Melastatin-1; | |
Q9QY24 (ZBP1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Z-DNA-binding protein 1; DNA-dependent activator of IFN-regulatory factors; Tumor stroma and activated macrophage protein DLM-1; | |
P01731 (CD8A_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | T-cell surface glycoprotein CD8 alpha chain; T-cell surface glycoprotein Lyt-2; CD8a; | |
P05977 (MYL1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Myosin light chain 1/3, skeletal muscle isoform; Myosin light chain alkali 1/2; | |
P62754 (RS6_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Small ribosomal subunit protein eS6; 40S ribosomal protein S6; Phosphoprotein NP33; | |
Q91WA6 (SHRPN_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Sharpin; Shank-associated RH domain-interacting protein; Shank-interacting protein-like 1; | |
P11590 (MUP4_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Major urinary protein 4; | |
Q3UR85 (MYRF_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Myelin regulatory factor; Myelin gene regulatory factor; Myelin regulatory factor, N-terminal; Myelin regulatory factor, C-terminal; | |
Q80U87 (UBP8_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Ubiquitin carboxyl-terminal hydrolase 8; Deubiquitinating enzyme 8; Ubiquitin isopeptidase Y; Ubiquitin thioesterase 8; Ubiquitin-specific-processing protease 8; | |
P01750 (HVM06_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Ig heavy chain V region 102; | |
Q9EPW9 (TLR6_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Toll-like receptor 6; CD286; | |
Q61768 (KINH_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Kinesin-1 heavy chain; Conventional kinesin heavy chain; Ubiquitous kinesin heavy chain; | |
O35305 (TNR11_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Tumor necrosis factor receptor superfamily member 11A; Osteoclast differentiation factor receptor; Receptor activator of NF-KB; CD265; | |
P27870 (VAV_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Proto-oncogene vav; p95vav; | |
Q61496 (DDX4_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | ATP-dependent RNA helicase DDX4; DEAD box protein 4; Mvh; Vasa homolog; | |
Q8BTI9 (PK3CB_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform; Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit beta; Serine/threonine protein kinase PIK3CB; | |
Q8BG40 (KTNB1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Katanin p80 WD40 repeat-containing subunit B1; p80 katanin; | |
Q9CUU3 (SYCP2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Synaptonemal complex protein 2; Synaptonemal complex lateral element protein; |
The house mouse (Mus musculus) is a small mammal of the order Rodentia, characteristically having a pointed snout, small rounded ears, and a long naked or almost hairless tail. House mice thrive under a variety of conditions; they are found in and around homes and commercial structures, as well as in open fields and agricultural lands where they build underground gangways and nests.
Mus musculus is one of the most important model organisms in biology and medicine. Mice are biologically similar to humans and are thus good models for genetic diseases and research on the immune system.
The complete mouse reference genome was sequenced in 2002.
From left to right: i) The number of proteins in the reference proteome of Mus musculus, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Mus musculus for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.
For information on the latest proteome for Mus musculus, please visit UniProtKB.
You can easily download the latest protein sequences for Mus musculus proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2024_02 that was used for the most up to date SWISS-MODEL Repository.
Proteins in proteome | Sequences modelled | Models |
21,709 | 18,791 | 43,366 |
Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.
The plot shows the evolution over years (x-axis) of the fraction of Mus musculus reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.
This chart shows the percentage of residues in the Mus musculus proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.
Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.
Single Chain | 2-mer | 3-mer | 4-mer | 5-mer | 6-mer | 7-mer | 8-mer | 9-mer | 10-mer | 11-mer | 12-mer | 14-mer | 16-mer | 18-mer | 20-mer | 21-mer | 24-mer | 25-mer | 26-mer | 32-mer | 34-mer | 36-mer | 39-mer | 40-mer | 46-mer | 48-mer | 55-mer | 56-mer | 60-mer | 62-mer |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
38,632 | 3,403 | 288 | 640 | 63 | 125 | 19 | 37 | 4 | 24 | 11 | 36 | 3 | 22 | 1 | 2 | 1 | 22 | 4 | 1 | 1 | 1 | 2 | 1 | 6 | 2 | 5 | 1 | 5 | 2 | 2 |