| UniProtKB AC (Name) | UniProtKB Section | Organism | Description | |
|---|---|---|---|---|
| P68404 (KPCB_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Protein kinase C beta type; | |
| O54781 (SRPK2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | SRSF protein kinase 2; SFRS protein kinase 2; Serine/arginine-rich protein-specific kinase 2; SRSF protein kinase 2 N-terminal; SRSF protein kinase 2 C-terminal; | |
| Q91YP2 (NEUL_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Neurolysin, mitochondrial; Microsomal endopeptidase; Mitochondrial oligopeptidase M; Neurotensin endopeptidase; | |
| Q9D805 (CAN9_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Calpain-9; Digestive tract-specific calpain; New calpain 4; | |
| Q3UYH7 (ARBK2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | G protein-coupled receptor kinase 3; Beta-adrenergic receptor kinase 2; | |
| O08983 (HPS1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | BLOC-3 complex member HPS1; Hermansky-Pudlak syndrome 1 protein homolog; | |
| P47708 (RP3A_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Rabphilin-3A; Exophilin-1; | |
| Q9ERH8 (S28A3_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Solute carrier family 28 member 3; Concentrative Na(+)-nucleoside cotransporter 3; | |
| Q3UXL4 (KIZ_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Centrosomal protein kizuna; Polo-like kinase 1 substrate 1; | |
| Q80UK0 (SESD1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | SEC14 domain and spectrin repeat-containing protein 1; Huntingtin-interacting protein-like protein; | |
| P35991 (BTK_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Tyrosine-protein kinase BTK; Agammaglobulinemia tyrosine kinase; B-cell progenitor kinase; Bruton tyrosine kinase; Kinase EMB; | |
| Q9Z2R9 (E2AK1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Eukaryotic translation initiation factor 2-alpha kinase 1; Heme-controlled repressor; Heme-regulated eukaryotic initiation factor eIF-2-alpha kinase; Heme-regulated inhibitor; Hemin-sensitive initiation factor 2-alpha kinase; | |
| Q8R3L2 (TCF25_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Ribosome quality control complex subunit TCF25; Nuclear localized protein 1; Transcription factor 25; | |
| P58462 (FOXP1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Forkhead box protein P1; Forkhead-related transcription factor 1; | |
| Q8VIJ6 (SFPQ_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Splicing factor, proline- and glutamine-rich; DNA-binding p52/p100 complex, 100 kDa subunit; Polypyrimidine tract-binding protein-associated-splicing factor; | |
| A1L3P4 (SL9A6_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Sodium/hydrogen exchanger 6; Na(+)/H(+) exchanger 6; Sodium/hydrogen exchanger; Solute carrier family 9 member 6; | |
| Q8BP56 (PGGHG_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Protein-glucosylgalactosylhydroxylysine glucosidase; Acid trehalase-like protein 1; | |
| Q921R4 (DJC14_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | DnaJ homolog subfamily C member 14; | |
| Q7TSI0 (ZNF12_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Zinc finger protein 12; | |
| Q3UHB8 (CC177_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Coiled-coil domain-containing protein 177; | |
| Q6PFY1 (FCSD1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | F-BAR and double SH3 domains protein 1; Protein nervous wreck 2; | |
| A2AD83 (FRMD7_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | FERM domain-containing protein 7; | |
| Q80TS7 (DEND_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Dendrin; | |
| Q9ERL9 (GCYA1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Guanylate cyclase soluble subunit alpha-1; Guanylate cyclase soluble subunit alpha-3; Soluble guanylate cyclase large subunit; | |
| Q9QXS6 (DREB_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Drebrin; Developmentally-regulated brain protein; | |
| Q61286 (HTF4_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Transcription factor 12; Class A helix-loop-helix transcription factor ME1; DNA-binding protein HTF4; E-box-binding protein; Transcription factor HTF-4; | |
| Q99J87 (DHX58_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | ATP-dependent RNA helicase DHX58; ATP-dependent helicase LGP2; Protein D11Lgp2; RIG-I-like receptor 3; RIG-I-like receptor Lgp2; | |
| Q61847 (MEP1B_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Meprin A subunit beta; Endopeptidase-2; Meprin B; | |
| Q8K4J0 (DCR1C_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Protein artemis; DNA cross-link repair 1C protein; SNM1-like protein; | |
| Q61216 (MRE11_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Double-strand break repair protein MRE11; Meiotic recombination 11 homolog 1; Meiotic recombination 11 homolog A; | |
| O54839 (EOMES_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Eomesodermin homolog; T-box brain protein 2; | |
| Q922X9 (ANM7_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Protein arginine N-methyltransferase 7; Histone-arginine N-methyltransferase PRMT7; [Myelin basic protein]-arginine N-methyltransferase PRMT7; | |
| P57716 (NICA_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Nicastrin; | |
| Q8BHW6 (SPT21_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Spermatogenesis-associated protein 21; | |
| Q99LE6 (ABCF2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | ATP-binding cassette sub-family F member 2; | |
| Q8K245 (UVRAG_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | UV radiation resistance-associated protein; | |
| Q8CDR2 (RSH6A_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Radial spoke head protein 6 homolog A; Radial spoke head-like protein 1; | |
| Q8K214 (SCMH1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Polycomb protein SCMH1; Sex comb on midleg homolog 1; | |
| Q9WVI9 (JIP1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | C-Jun-amino-terminal kinase-interacting protein 1; Islet-brain-1; JNK MAP kinase scaffold protein 1; Mitogen-activated protein kinase 8-interacting protein 1; | |
| Q80U04 (PJA2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | E3 ubiquitin-protein ligase Praja-2; RING finger protein 131; RING-type E3 ubiquitin transferase Praja-2; | |
| Q8CG85 (MAMC2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | MAM domain-containing protein 2; MAM domain-containing proteoglycan; | |
| Q8C031 (LRC4C_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Leucine-rich repeat-containing protein 4C; Netrin-G1 ligand; | |
| Q9R158 (AD26A_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Disintegrin and metalloproteinase domain-containing protein 26A; Testase-3; | |
| Q3ULB5 (PAK6_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Serine/threonine-protein kinase PAK 6; p21-activated kinase 6; | |
| P98064 (MASP1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Mannan-binding lectin serine protease 1; Complement-activating component of Ra-reactive factor; Mannose-binding lectin-associated serine protease 1; Mannose-binding protein-associated serine protease; Ra-reactive factor serine protease p100; Serine protease 5; Mannan-binding lectin serine protease 1 heavy chain; Mannan-binding lectin serine protease 1 light chain; | |
| B2RWW0 (TAGAP_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | T-cell activation Rho GTPase-activating protein; T-cell activation GTPase-activating protein; | |
| Q91YR5 (EFNMT_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | eEF1A lysine and N-terminal methyltransferase; Methyltransferase-like protein 13; eEF1A lysine methyltransferase; 2.1.1.-; eEF1A N-terminal methyltransferase; 2.1.1.-; | |
| Q8BMF4 (ODP2_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial; Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; Pyruvate dehydrogenase complex component E2; | |
| A4Q9F3 (TTL10_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Protein polyglycylase TTLL10; Tubulin--tyrosine ligase-like protein 10; | |
| Q8VDQ9 (KRI1_MOUSE) | Swiss-Prot | Mus musculus (Mouse) | Protein KRI1 homolog; |
The house mouse (Mus musculus) is a small mammal of the order Rodentia, characteristically having a pointed snout, small rounded ears, and a long naked or almost hairless tail. House mice thrive under a variety of conditions; they are found in and around homes and commercial structures, as well as in open fields and agricultural lands where they build underground gangways and nests.
Mus musculus is one of the most important model organisms in biology and medicine. Mice are biologically similar to humans and are thus good models for genetic diseases and research on the immune system.
The complete mouse reference genome was sequenced in 2002.
From left to right: i) The number of proteins in the reference proteome of Mus musculus, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Mus musculus for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.
For information on the latest proteome for Mus musculus, please visit UniProtKB.
You can easily download the latest protein sequences for Mus musculus proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2026_01 that was used for the most up to date SWISS-MODEL Repository.
| Proteins in proteome | Sequences modelled | Models |
| 21,852 | 19,249 | 43,644 |
Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.
The plot shows the evolution over years (x-axis) of the fraction of Mus musculus reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.
This chart shows the percentage of residues in the Mus musculus proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.
Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.
| Single Chain | 2-mer | 3-mer | 4-mer | 5-mer | 6-mer | 7-mer | 8-mer | 9-mer | 10-mer | 11-mer | 12-mer | 14-mer | 15-mer | 16-mer | 18-mer | 20-mer | 21-mer | 22-mer | 24-mer | 25-mer | 26-mer | 30-mer | 32-mer | 34-mer | 39-mer | 40-mer | 44-mer | 48-mer | 60-mer | 62-mer |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38,810 | 3,416 | 304 | 658 | 59 | 144 | 18 | 53 | 2 | 24 | 7 | 51 | 6 | 2 | 23 | 3 | 2 | 3 | 1 | 20 | 4 | 1 | 1 | 3 | 1 | 1 | 7 | 1 | 4 | 11 | 4 |