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Filter results by: Taxon Proteome
1 - 50 of 27454 UniProtKB matches
(33611 models, 553 structures.)
UniProtKB AC
(Name)
UniProtKB Section
 
Homology Model
 
Experimental Structure
OrganismDescription
Q10926
(YWR2_CAEEL)
Swiss-ProtCaenorhabditis elegansUncharacterized protein B0302.2;
Q9N3X8
(SDK_CAEEL)
Swiss-ProtCaenorhabditis elegansProtein sidekick homolog;
Neuronal IgCAM protein 4;
G5EGQ6
(TEN1_CAEEL)
Swiss-Prot
Caenorhabditis elegansTeneurin-1;
Q17551
(RPM1_CAEEL)
Swiss-Prot
Caenorhabditis elegansE3 ubiquitin-protein ligase rpm-1;
Pam/highwire/rpm-1 protein;
Regulator of presynaptic morphology protein 1;
Synapse defective protein 3;
Q10927
(YWR4_CAEEL)
Swiss-Prot
Caenorhabditis elegansUncharacterized protein B0302.4;
P34576
(MUA3_CAEEL)
Swiss-Prot
Caenorhabditis elegansTransmembrane cell adhesion receptor mua-3;
Muscle attachment abnormal protein 3;
Q9TZM3
(LRK1_CAEEL)
Swiss-Prot
Caenorhabditis elegansLeucine-rich repeat serine/threonine-protein kinase 1;
Leucine-rich repeats, ras-like domain, kinase protein 1;
PARK8-related kinase;
Q9TW65
(DMD_CAEEL)
Swiss-Prot
Caenorhabditis elegansDystrophin-1;
Q21313
(EPI1_CAEEL)
Swiss-Prot
Caenorhabditis elegansLaminin-like protein epi-1;
Laminin alphaB;
Laminin subunit alpha epi-1;
Q95Q95
(TOR_CAEEL)
Swiss-Prot
Caenorhabditis elegansTarget of rapamycin homolog;
CeTOR;
Lethal protein 363;
P34616
(CADH3_CAEEL)
Swiss-Prot
Caenorhabditis elegansCadherin-3;
Q09624
(PKD1_CAEEL)
Swiss-ProtCaenorhabditis elegansLocation of vulva defective 1;
Polycystic kidney disease 1 protein homolog;
Polycystin-1;
Q06561
(UNC52_CAEEL)
Swiss-ProtCaenorhabditis elegansBasement membrane proteoglycan;
Perlecan homolog;
Uncoordinated protein 52;
Q19319
(CADH4_CAEEL)
Swiss-Prot
Caenorhabditis elegansCadherin-4;
Q21920
(ANKHM_CAEEL)
Swiss-Prot
Caenorhabditis elegansAnkyrin repeat and KH domain-containing protein mask-1;
Multiple ankyrin repeats single KH domain homolog;
Q09221
(CPNA2_CAEEL)
Swiss-Prot
Caenorhabditis elegansCopine family protein 2;
Q20911
(CUBN_CAEEL)
Swiss-Prot
Caenorhabditis elegansCubilin homolog;
Q04833
(LRP_CAEEL)
Swiss-Prot
Caenorhabditis elegansLow-density lipoprotein receptor-related protein;
V6CLP5
(KETN1_CAEEL)
Swiss-Prot
Caenorhabditis elegansKettin homolog;
Q23551
(UNC22_CAEEL)
Swiss-Prot
Caenorhabditis elegansTwitchin;
Uncoordinated protein 22;
G5EEV2
(TRR1_CAEEL)
Swiss-Prot
Caenorhabditis elegansTranscription-associated protein 1;
Q19542
(DYHC2_CAEEL)
Swiss-Prot
Caenorhabditis elegansCytoplasmic dynein 2 heavy chain 1;
Abnormal chemotaxis protein 3;
O01761
(UNC89_CAEEL)
Swiss-Prot
Caenorhabditis elegansMuscle M-line assembly protein unc-89;
Inactive serine/threonine-protein kinase unc-89;
Obscurin;
Uncoordinated protein 89;
Q18685
(UN112_CAEEL)
Swiss-Prot
Caenorhabditis elegansProtein unc-112;
Mitogen-inducible mig-2 protein-like;
Uncoordinated protein 112;
Q09298
(PINK1_CAEEL)
Swiss-Prot
Caenorhabditis elegansSerine/threonine-protein kinase pink-1, mitochondrial;
PTEN-induced kinase 1 homolog;
Q21629
(EGG2_CAEEL)
Swiss-ProtCaenorhabditis elegansLDL receptor repeat-containing protein egg-2;
Egg sterile protein 2;
P05690
(VIT2_CAEEL)
Swiss-Prot
Caenorhabditis elegansVitellogenin-2;
Q9N4H4
(PARP1_CAEEL)
Swiss-Prot
Caenorhabditis elegansPoly [ADP-ribose] polymerase 1;
Poly ADP-ribose metabolism enzyme 1;
Protein poly-ADP-ribosyltransferase parp-1;
P56174
(ILB5_CAEEL)
Swiss-Prot
Caenorhabditis elegansProbable insulin-like peptide beta-type 5;
O16850
(FOXO_CAEEL)
Swiss-Prot
Caenorhabditis elegansForkhead box protein O;
Abnormal dauer formation protein 16;
Q9XXR3
(HMT11_CAEEL)
Swiss-Prot
Caenorhabditis elegansProton myo-inositol cotransporter hmit-1.1;
H(+)-myo-inositol symporter hmit-1.1;
P38433
(ACE1_CAEEL)
Swiss-Prot
Caenorhabditis elegansAcetylcholinesterase 1;
Q7YTU4
(ERO1_CAEEL)
Swiss-Prot
Caenorhabditis elegansEndoplasmic reticulum oxidoreductin-1;
Q86DA5
(SARM1_CAEEL)
Swiss-Prot
Caenorhabditis elegansNAD(+) hydrolase tir-1;
Neuronal symmetry protein 2;
SARM1 homolog;
Sterile alpha and TIR motif-containing protein tir-1;
P34885
(KPC1B_CAEEL)
Swiss-Prot
Caenorhabditis elegansProtein kinase C-like 1B;
P35129
(UBC2_CAEEL)
Swiss-Prot
Caenorhabditis elegansUbiquitin-conjugating enzyme E2 2;
E2 ubiquitin-conjugating enzyme 2;
Lethal protein 70;
Ubiquitin carrier protein 2;
Ubiquitin-protein ligase 2;
P34313
(BUD31_CAEEL)
Swiss-Prot
Caenorhabditis elegansProtein BUD31 homolog;
Protein G10 homolog;
Q20561
(HLH13_CAEEL)
Swiss-Prot
Caenorhabditis elegansHelix-loop-helix protein 13;
Fer3-like protein;
Nephew of atonal 3;
G5EE01
(PTEN_CAEEL)
Swiss-Prot
Caenorhabditis elegansPhosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase daf-18;
Abnormal dauer formation protein 18;
P56407
(HM09_CAEEL)
Swiss-Prot
Caenorhabditis elegansHomeobox protein ceh-9;
Q10129
(RT16_CAEEL)
Swiss-Prot
Caenorhabditis elegansSmall ribosomal subunit protein bS16m;
28S ribosomal protein S16, mitochondrial;
P48162
(R23A1_CAEEL)
Swiss-Prot
Caenorhabditis elegansLarge ribosomal subunit protein uL23A;
60S ribosomal protein L23a 1;
P34427
(LIN36_CAEEL)
Swiss-ProtCaenorhabditis elegansProtein lin-36;
Abnormal cell lineage protein 36;
Q17632
(RRP44_CAEEL)
Swiss-Prot
Caenorhabditis elegansProbable exosome complex exonuclease RRP44;
Protein DIS3 homolog;
Ribosomal RNA-processing protein 44;
G5EDT1
(LIN35_CAEEL)
Swiss-Prot
Caenorhabditis elegansRetinoblastoma-like protein homolog lin-35;
Abnormal cell lineage protein 35;
Synthetic multivulva protein lin-35;
P91167
(ARPC5_CAEEL)
Swiss-Prot
Caenorhabditis elegansProbable actin-related protein 2/3 complex subunit 5;
Arp2/3 complex 16 kDa subunit;
P34557
(YNP4_CAEEL)
Swiss-ProtCaenorhabditis elegansUncharacterized protein T05G5.4;
Q09242
(BCL7_CAEEL)
Swiss-ProtCaenorhabditis elegansBCL7-like protein;
P90897
(RDE12_CAEEL)
Swiss-Prot
Caenorhabditis elegansDEAD-box ATP-dependent RNA helicase rde-12;
RNA interference defective protein 12;
Q20647
(R23A2_CAEEL)
Swiss-Prot
Caenorhabditis elegansLarge ribosomal subunit protein uL23B;
60S ribosomal protein L23a 2;
1 - 50 of 27454
Caenorhabditis elegans

Caenorhabditis elegans is a free-living, transparent nematode, about 1 mm in length, that lives in temperate soil environments. The name means "elegant new rod".

C. elegans is a model organism for nervous system development as well as senescence. Of interest to researchers is the phenomenon of eutely: each adult hermaphrodite has exactly 959 and each adult male exactly 1031 somatic cell nuclei

C. elegans was the first multicellular organism to have its whole genome sequenced in 1998.

"Caenorhabditis elegans", Wikipedia: The Free Encyclopedia

Protein models in Repository

From left to right: i) The number of proteins in the reference proteome of Caenorhabditis elegans, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Caenorhabditis elegans for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.

For information on the latest proteome for Caenorhabditis elegans, please visit UniProtKB.

You can easily download the latest protein sequences for Caenorhabditis elegans proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2024_01 that was used for the most up to date SWISS-MODEL Repository.

Proteins in proteomeSequences modelledModels
19,82712,74422,978

Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.

Structural Coverage

The plot shows the evolution over years (x-axis) of the fraction of Caenorhabditis elegans reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.

Residue Coverage

This chart shows the percentage of residues in the Caenorhabditis elegans proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.

Oligomeric State

Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.

Single Chain2-mer3-mer4-mer5-mer6-mer7-mer8-mer9-mer10-mer12-mer14-mer16-mer20-mer24-mer26-mer32-mer34-mer40-mer41-mer44-mer48-mer55-mer60-mer62-mer
20,2291,8531633731039883691338584101619321221
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