| UniProtKB AC (Name) | UniProtKB Section | Organism | Description | |
|---|---|---|---|---|
| C0HL66 (H33A_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Histone H3.3A; H3.A; | |
| C0HL67 (H33B_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Histone H3.3B; H3.B; | |
| Q9VM92 (TTL3B_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Tubulin glycylase 3B; | |
| Q9VMX6 (SMAL1_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1; | |
| Q9V3D6 (CPSF2_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Probable cleavage and polyadenylation specificity factor subunit 2; Cleavage and polyadenylation specificity factor 100 kDa subunit; | |
| P21525 (FOSLA_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Transcription factor kayak, isoforms A/B/F; AP-1; Fos-related antigen; | |
| P18934 (NU4LM_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | NADH-ubiquinone oxidoreductase chain 4L; NADH dehydrogenase subunit 4L; | |
| O97420 (U184_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | UPF0184 protein CG14818; | |
| O97143 (PLK4_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Serine/threonine-protein kinase PLK4; Polo-like kinase 4; Serine/threonine-protein kinase SAK; | |
| P25991 (SUF_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Protein suppressor of forked; | |
| Q9V407 (AXN_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Axin; Axis inhibition protein; d-Axin; | |
| Q9VAD6 (COG7_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Conserved oligomeric Golgi complex subunit 7; Component of oligomeric Golgi complex 7; | |
| Q7KN90 (SYCC_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Cysteine--tRNA ligase, cytoplasmic; Cysteinyl-tRNA synthetase; | |
| Q9VM33 (EFGM_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Elongation factor G, mitochondrial; Elongation factor G 1, mitochondrial; Elongation factor G1; Protein iconoclast; | |
| Q9W4M9 (NSUN2_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | tRNA (cytosine(34)-C(5))-methyltransferase; NOP2/Sun domain family member 2 ortholog; | |
| Q9VC61 (CRERF_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Protein CREBRF homolog; Protein Repressed by Tor; | |
| Q9VN03 (SUV3_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | ATP-dependent RNA helicase SUV3 homolog, mitochondrial; | |
| Q9VYD7 (TIM9_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Mitochondrial import inner membrane translocase subunit Tim9; | |
| Q8MSF5 (RNK_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Ribonuclease kappa; | |
| Q9VI60 (ENY2B_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Enhancer of yellow 2b transcription factor; Testis-specific e(y)2 paralog; | |
| P0CG69 (UBIQP_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Polyubiquitin; Ubiquitin; | |
| Q9W5D4 (POMT2_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Protein O-mannosyl-transferase 2; Dolichyl-phosphate-mannose--protein mannosyltransferase 2; Protein twisted; | |
| Q05201 (EYA_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Protein phosphatase eya; Developmental protein eyes absent; Protein Clift; | |
| Q8MR31 (SLIP1_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Slo-interacting protein 1; dSLIP1; | |
| Q9VIF0 (NOC2L_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Nucleolar complex protein 2; | |
| Q8MKW7 (RNZ_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Ribonuclease Z, mitochondrial; Juvenile hormone-inducible protein 1; dRNAse Z; tRNA 3 endonuclease; tRNase Z; | |
| Q9VDE6 (EXOC6_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Exocyst complex component 6; Exocyst complex component Sec15; | |
| Q9VUK8 (GARS_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Glycine--tRNA ligase; Diadenosine tetraphosphate synthetase; Glycyl-tRNA synthetase; | |
| Q9VIE6 (MCM10_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Protein MCM10 homolog; Sensitized chromosome inheritance modifier 19; | |
| Q9VKM1 (PIWI_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Protein piwi; Protein P-element induced wimpy testis; | |
| Q9VGQ9 (DPH3_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Diphthamide biosynthesis protein 3; | |
| P18824 (ARM_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Armadillo segment polarity protein; | |
| P42281 (ACBP_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Acyl-CoA-binding protein homolog; Diazepam-binding inhibitor homolog; | |
| Q9XTL9 (PYG_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Glycogen phosphorylase; | |
| Q24472 (RBF_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Retinoblastoma family protein; | |
| Q9VU58 (NPLP2_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Neuropeptide-like 2; NEF peptide; | |
| Q7PL76 (VPS41_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Vacuolar protein sorting-associated protein 41 homolog; Protein light; | |
| Q9VL72 (SMRCD_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 homolog; Enhancer trap locus homolog 1; | |
| Q9VPI2 (IR21A_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Ionotropic receptor 21a; | |
| P23654 (NRT_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Neurotactin; | |
| P13060 (EF2_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Eukaryotic translation elongation factor 2; Elongation factor 2; | |
| Q9V466 (NU107_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Nuclear pore complex protein Nup107; Nucleoporin Nup107; | |
| Q9VVN4 (ATRIP_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | ATR-interacting protein mus304; Mutagen-sensitive protein 304; | |
| P08155 (KRH1_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Krueppel homolog 1; Krueppel homologous protein 1; | |
| P29349 (CSW_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Tyrosine-protein phosphatase corkscrew; | |
| Q05733 (DCHS_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Histidine decarboxylase; | |
| Q9Y103 (TFP11_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Septin-interacting protein 1; Septin and tuftelin-interacting protein 1; | |
| P11584 (ITBX_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Integrin beta-PS; Position-specific antigen beta subunit; Protein myospheroid; Protein olfactory C; | |
| Q07171 (GELS_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Gelsolin; | |
| Q02870 (ERCC3_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | General transcription and DNA repair factor IIH helicase/translocase subunit XPB; ATP-dependent DNA helicase hay; DNA 3'-5' helicase/translocase XPB; DNA excision repair protein haywire; ERCC-3 homolog protein; ERCC3Dm; |
Drosophila melanogaster is a species of fruit fly in the family Drosophilidae. The species is known generally as the common fruit fly or vinegar fly. D. melanogaster is commonly considered a pest due to its tendency to infest habitations and establishments where fruit is found; the flies may collect in homes, restaurants, stores, and other locations.
Starting with Charles W. Woodworth's proposal of the use of this species as a model organism, D. melanogaster continues to be widely used for biological research in studies of genetics, physiology, microbial pathogenesis, and life history evolution. It is typically used because it is an animal species that is easy to care for, has four pairs of chromosomes, breeds quickly, and lays many eggs.
The genome of D. melanogaster was first sequenced in 2000.
From left to right: i) The number of proteins in the reference proteome of Drosophila melanogaster, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Drosophila melanogaster for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.
For information on the latest proteome for Drosophila melanogaster, please visit UniProtKB.
You can easily download the latest protein sequences for Drosophila melanogaster proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2026_01 that was used for the most up to date SWISS-MODEL Repository.
| Proteins in proteome | Sequences modelled | Models |
| 13,826 | 10,389 | 19,931 |
Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.
The plot shows the evolution over years (x-axis) of the fraction of Drosophila melanogaster reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.
This chart shows the percentage of residues in the Drosophila melanogaster proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.
Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.
| Single Chain | 2-mer | 3-mer | 4-mer | 5-mer | 6-mer | 7-mer | 8-mer | 9-mer | 10-mer | 12-mer | 14-mer | 15-mer | 16-mer | 18-mer | 24-mer | 25-mer | 32-mer | 34-mer | 40-mer | 48-mer | 60-mer | 62-mer |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17,463 | 1,689 | 135 | 424 | 29 | 95 | 8 | 23 | 2 | 9 | 10 | 6 | 1 | 5 | 1 | 9 | 1 | 8 | 1 | 6 | 2 | 3 | 1 |