SMTL ID : 5ep0.1

Quorum-Sensing Signal Integrator LuxO - Receiver+Catalytic Domains

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: E.172, S.173, G.174, T.175, G.176, K.177, E.178 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:G.174, A:T.175, A:T.175, A:G.176, A:K.177, A:E.178 Water bridges: A:K.177, A:K.177, A:K.177, A:V.179 Salt bridges: A:K.177 SO4.2: 5 residues within 4Å: Chain A: I.48, H.74, G.75, N.76, V.77 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.75, A:N.76, A:N.76, A:V.77 Salt bridges: A:H.74 SO4.3: 5 residues within 4Å: Chain A: S.344, P.346, V.347, K.380, L.381 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.344, A:S.344, A:L.381 Water bridges: A:E.382 SO4.4: 2 residues within 4Å: Chain A: P.204, K.205 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.205 Salt bridges: A:K.205 SO4.5: 4 residues within 4Å: Chain A: C.245, E.246, R.285, R.295 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.246 Water bridges: A:R.285, A:R.285 Salt bridges: A:R.285 SO4.6: 2 residues within 4Å: Chain A: I.259, R.303 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.166 Salt bridges: A:R.303

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.7: 3 residues within 4Å: Chain A: R.297, E.298, D.299 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.297, A:E.298, A:D.299, A:D.299 Water bridges: A:F.296 EDO.8: 8 residues within 4Å: Chain A: L.314, R.315, G.318, F.351, E.352, Y.354, S.355, W.356 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.318, A:Y.354 Water bridges: A:G.318

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Boyaci, H. et al., Structure, Regulation, and Inhibition of the Quorum-Sensing Signal Integrator LuxO. Plos Biol. (2016)

Release Date

2016-04-20

Peptides

Putative repressor protein luxO: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Putative repressor protein luxO