- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 0.99 Å
- Oligo State
- homo-tetramer
- Ligands
- 12 x MG: MAGNESIUM ION(Non-covalent)
- 4 x XYL: Xylitol(Non-covalent)
XYL.3: 16 residues within 4Å:- Chain A: W.14, H.52, T.88, F.92, V.133, W.135, E.179, K.181, E.215, H.218, D.243, D.253, D.285
- Chain C: F.24
- Ligands: MG.1, MG.2
9 PLIP interactions:9 interactions with chain A- Hydrogen bonds: A:W.14, A:H.52, A:K.181, A:E.215, A:H.218, A:D.285
- Water bridges: A:T.88, A:T.89, A:N.213
XYL.7: 16 residues within 4Å:- Chain B: W.14, H.52, T.88, F.92, V.133, W.135, E.179, K.181, E.215, H.218, D.243, D.253, D.285
- Chain D: F.24
- Ligands: MG.5, MG.6
9 PLIP interactions:9 interactions with chain B- Hydrogen bonds: B:W.14, B:H.52, B:K.181, B:E.215, B:H.218, B:D.285
- Water bridges: B:T.88, B:T.89, B:N.213
XYL.11: 16 residues within 4Å:- Chain A: F.24
- Chain C: W.14, H.52, T.88, F.92, V.133, W.135, E.179, K.181, E.215, H.218, D.243, D.253, D.285
- Ligands: MG.9, MG.10
9 PLIP interactions:9 interactions with chain C- Hydrogen bonds: C:W.14, C:H.52, C:K.181, C:E.215, C:H.218, C:D.285
- Water bridges: C:T.88, C:T.89, C:N.213
XYL.15: 16 residues within 4Å:- Chain B: F.24
- Chain D: W.14, H.52, T.88, F.92, V.133, W.135, E.179, K.181, E.215, H.218, D.243, D.253, D.285
- Ligands: MG.13, MG.14
9 PLIP interactions:9 interactions with chain D- Hydrogen bonds: D:W.14, D:H.52, D:K.181, D:E.215, D:H.218, D:D.285
- Water bridges: D:T.88, D:T.89, D:N.213
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Xu, Y. et al., Xylitol binding to the M1 site of glucose isomerase induces a conformational change in the substrate binding channel. Biochem.Biophys.Res.Commun. (2023)
- Release Date
- 2023-10-04
- Peptides
- Xylose isomerase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 0.99 Å
- Oligo State
- homo-tetramer
- Ligands
- 12 x MG: MAGNESIUM ION(Non-covalent)
- 4 x XYL: Xylitol(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Xu, Y. et al., Xylitol binding to the M1 site of glucose isomerase induces a conformational change in the substrate binding channel. Biochem.Biophys.Res.Commun. (2023)
- Release Date
- 2023-10-04
- Peptides
- Xylose isomerase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A