SMTL ID : 8wdh.1

Crystal structure of glucose isomerase by fixed-target pink-beam serial synchrotron crystallography

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-tetramer

Ligands

8 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 5 residues within 4Å: Chain A: E.215, D.253, D.255, D.285 Ligands: MG.2 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.255 MG.2: 6 residues within 4Å: Chain A: E.179, E.215, H.218, D.243, D.285 Ligands: MG.1 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:E.179, A:E.215, A:D.285 MG.3: 5 residues within 4Å: Chain B: E.215, D.253, D.255, D.285 Ligands: MG.4 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:D.255 MG.4: 6 residues within 4Å: Chain B: E.179, E.215, H.218, D.243, D.285 Ligands: MG.3 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:E.179, B:E.215, B:D.285 MG.5: 5 residues within 4Å: Chain C: E.215, D.253, D.255, D.285 Ligands: MG.6 1 PLIP interactions: 1 interactions with chain C Metal complexes: C:D.255 MG.6: 6 residues within 4Å: Chain C: E.179, E.215, H.218, D.243, D.285 Ligands: MG.5 3 PLIP interactions: 3 interactions with chain C Metal complexes: C:E.179, C:E.215, C:D.285 MG.7: 5 residues within 4Å: Chain D: E.215, D.253, D.255, D.285 Ligands: MG.8 1 PLIP interactions: 1 interactions with chain D Metal complexes: D:D.255 MG.8: 6 residues within 4Å: Chain D: E.179, E.215, H.218, D.243, D.285 Ligands: MG.7 3 PLIP interactions: 3 interactions with chain D Metal complexes: D:E.179, D:E.215, D:D.285

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nam, K.H., Fixed-Target Pink-Beam Serial Synchrotron Crystallography at Pohang Light Source II. Crystals (2023)

Release Date

2023-11-29

Peptides

Xylose isomerase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

Xylose isomerase

Related Entries With Identical Sequence